Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme94595g00001 CTTTCACATTCAAACGGTGTTCCGGTGCATAAAGATTATGTTGTATTTGTTCCCAATGGCCCACCGCGGCAGGACCTGTGGCTTGCACTGCATCCAGATACAGCTTCTAAGTCCAATTACTACGACGCAATCTTGAATGGCGTAGAGATATTCAAAATCAGTGATAGTAAAGGTAATCTGGCAGGGACAAACCCTCCTCCTCTGCCGATGCAAGACTTAATTGACGTGTCATTGGCTAGGAAATCTAGTCATGGTAAATCTAAGAGTCATACAGGAATTATTGCTGGAGGTGTTGGGGGAGGAGTTGTTTTACTACTTTTGATTGGACTATTTGCTTTTGGTACATCTCGTCGCCGTAGGAATGGAAAAGACTCTAGTACAAGTGAAGGGCCGTCTGGCTGGCTTCCACTTTCTCTTTATGGTAATTCACACTCTGCAGCTTCTGGCAAGACCAACACGACTGGAAGTTACACATCCACTCTTCCGTCAAACCTTTGTCGTCATTTCTCATTTGCTGAAATCAAGGCTGCTACAAACAACTTTGACGAGGCTTTAATTCTCGGTGTGGGAGGATTTGGCAAGGTTTACAAAGGAGAAATTGACGGTGGATCAACCAAAGTTGCAATTAAACGTGGGAATCCACTCTCCGAGCAGGGTGTGCACGAATTCCAAACTGAAATTGAGATGCTCTCCAAACTTCGTCACCGTCA 710 0.4493 LSHSNGVPVHKDYVVFVPNGPPRQDLWLALHPDTASKSNYYDAILNGVEIFKISDSKGNLAGTNPPPLPMQDLIDVSLARKSSHGKSKSHTGIIAGGVGGGVVLLLLIGLFAFGTSRRRRNGKDSSTSEGPSGWLPLSLYGNSHSAASGKTNTTGSYTSTLPSNLCRHFSFAEIKAATNNFDEALILGVGGFGKVYKGEIDGGSTKVAIKRGNPLSEQGVHEFQTEIEMLSKLRHR 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme94595g00001 236 Gene3D Phosphorylase Kinase; domain 1 166 236 - -
Trme94595g00001 236 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 63 236 - -
Trme94595g00001 236 SUPERFAMILY Protein kinase-like (PK-like) 154 236 IPR011009 -
Trme94595g00001 236 ProSitePatterns Protein kinases ATP-binding region signature. 187 210 IPR017441 GO:0005524
Trme94595g00001 236 ProSiteProfiles Protein kinase domain profile. 181 236 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme94595g00001 236 FunFam receptor-like protein kinase FERONIA 143 236 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme94595g00001 Trme-Chr94595 1 710 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme94595g00001 2 236 Receptor kinase-like Gene Family AT3G51550 70.213 1.24e-103 318
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Trme94595g00001 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme94595g00001 - - gmx:100499644 398.282