Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme94593g00001 ATGCCTGAAAATTTCAATGATCATTATAATGACATGAAGAGAATGAAAGGTAGAAACCAATCCATTTCAGGATTCAATTCTGTCTCCTCTCCTAGTGTCATAGCCTCGGATATAAAACCTAGTTTTGTTCCTCTAAATCTTTTGGAAACTCTCCCGGCATTAACCGTAACAACTCCAGTGTCTGATGAGCCAACAKGATCTTTAGCTTCTTCTGCTACTACACCGAAATATCCGAATTTGACTTTGTTTTTGCAGGAACCATCTATGCTATACTCATCAACAACATCACATATCAAAAGTAGTGAAATCATCTCAACAAATTCATATCCTACATATCCTATGTCACAATTTGCCCTACCTCAGCATCAACAAAACAGTGGTTATGAATTTTACGATTCAAACAAGAATATGATGACAAACTTGCAATCCAAGTCTTTCAATGAGAATTGGTTGAGTGCTACAAAGACTCAACCTATGAAGTATGGTGCAAGAAGGAAGGTTTTCAAAGGGGTGAGGCAGAGACATTGGGGGAAATGGGTTGCTGAAATTAGGCTACCAAGAA 562 0.379 MPENFNDHYNDMKRMKGRNQSISGFNSVSSPSVIASDIKPSFVPLNLLETLPALTVTTPVSDEPTXSLASSATTPKYPNLTLFLQEPSMLYSSTTSHIKSSEIISTNSYPTYPMSQFALPQHQQNSGYEFYDSNKNMMTNLQSKSFNENWLSATKTQPMKYGARRKVFKGVRQRHWGKWVAEIRLPR 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme94593g00001 187 ProSiteProfiles AP2/ERF domain profile. 167 187 IPR001471 GO:0003700|GO:0006355
Trme94593g00001 187 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 12 187 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme94593g00001 Trme-Chr94593 1 562 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme94593g00001 34 187 AP2-EREBP Transcription Factor Family AT4G13620 40.606 1.51e-21 88.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme94593g00001 - - gmx:100820013 203.371