Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme944g00001 ATGGGTACCTCTTCTGAAAACGCCGCCGGTGGTGGCCGAGGCACCGCCGTCCCCAAAGAAGTCGACTACGCGAACTACTTCTGCACCTATTCCTTTCTCTACCATCAAAAAGAGATGCTCTCAGATCGTGTTCGAATGGACGCTTACTTCAATGCCGTTTTTGAAAACAAACATCACTTTAAGGATAAGGTTGTTTTGGATGTGGGAGCTGGAAGTGGTATTCTTGCTATATGGTCAGCTCAGGCAGGTGCTAAGAAGGTTTATGCAGTGGAAGCTACTAAGATGTCAGAACACGCCCGTGCACTTGTTAAAGCAAATAATCTTGAGCAAGTAGTCGAAGTTATTGAGGGATCTGTGGAGGATGTTACATTGCCAGAGAAAGTTGATGTCATCATATCTGAATGGATGGGTTATTTTCTTCTGCGAGAATCTATGTTTGATTCAGTTATATGTGCTCGTGACCGCTGGCTCAAACCAACAGGATTAATGTATCCTAGTCATGCTCGCATGTGGATGGCACCTATCAGAACTGGGATAGTAGAACAAAAATTGGGTGATTACCAGTCAGCTATGGGTGATTGGCACAACTTCGTCGACGAAACAAAAGCTTTCTATGGTGTTGATATGAGCACTTTGGCGAAGCCTTTTGCAGAGGAGCAAAGGAAGTACTATCTACAGGCAACTCCAGATCATGTGCTGGCTTGTAGAGACAGGATTGACATGTTCTACAGGGTTGAACGATCCAAATCCTTACATGGAAATCATTTTGGTTTGATTGCGGGTTGA 786 0.4453 MGTSSENAAGGGRGTAVPKEVDYANYFCTYSFLYHQKEMLSDRVRMDAYFNAVFENKHHFKDKVVLDVGAGSGILAIWSAQAGAKKVYAVEATKMSEHARALVKANNLEQVVEVIEGSVEDVTLPEKVDVIISEWMGYFLLRESMFDSVICARDRWLKPTGLMYPSHARMWMAPIRTGIVEQKLGDYQSAMGDWHNFVDETKAFYGVDMSTLAKPFAEEQRKYYLQATPDHVLACRDRIDMFYRVERSKSLHGNHFGLIAG 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme944g00001 261 FunFam Protein arginine N-methyltransferase PRMT10 20 165 - -
Trme944g00001 261 Gene3D Vaccinia Virus protein VP39 20 165 IPR029063 -
Trme944g00001 261 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 19 220 IPR025799 GO:0016274|GO:0018216
Trme944g00001 261 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 30 218 IPR029063 -
Trme944g00001 261 Pfam Ribosomal protein L11 methyltransferase (PrmA) 61 134 - -
Trme944g00001 261 Gene3D - 167 237 - -
Trme944g00001 261 CDD AdoMet_MTases 65 164 - -
Trme944g00001 261 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 20 261 IPR025799 GO:0016274|GO:0018216
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme944g00001 Trme-Chr944 954 3454 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme944g00001 25 222 C2H2 Transcription Factor Family AT3G12270 39.048 1.32e-36 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme944g00001 K11434 - gmx:100795134 398.667