Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme9442g00001 ATGCATGCCTTGATACAAGAAATGGGACGGGAAATTGTTCGTCAAGAATCTACCAAAGACCCTGGGAGACGCAGTCGATTGTATGATCACAAAGAAGTATACGATGTACTGAAGAATAACATGGGCACCGATGCAATTGAAGGCATAAGCCTAGATGTGTCTGAAATTAGAGGTATGAATTTGAGCTCTGACATTTTTGTGAAGATGATTAACCTAAGATTTCTCAAATTCTACTCTCGTTCGGGTGCGAGATGTAATGTTTCCCTTCCTGCTGGCCTCGAGTCATTGTCTAATAAATTAAGGTACCTCCATTGGAGTGCATATCCTTTGAAGTCGCTACCAACAACTTTTTCTCCTGAGAAACTTGTTGAGCTTTACATGCCAAACAGTAATGTTCAAAGATTATGGCACGGAGTGCAGGATCTTACTAATTTAAAGAAAATGGACCTAAGCTGTTGTGAGCAATTGATAGAGCTTCCTGATTTCTCCATGGCAACAAATCTCCAGACCATTAACCTCTCTAGATGTGTAAGGCTGCGTCATGTTCACACGTCTATTTTATCTCTCAAAAAACTTGTCAATTTAAACCTGGTTTGGTGCAAAAGGCTCAAGAGTCTTCTTAGCAATGTCCCTTTAAGTTCTTTGAGAATTCTCGAGCTCTATGGCTGCTCAAGTCTCAAGGAATTTTCAGTGACAGCTGCAGAAATGACATACTTGGATTTACGATGTACTGCTATTAATGAATTGCCGGAATCAGTTAAGTACCTAAGCAGTCTTATTAACTTGGAGCTGAGTAGCTGTGGAAACCTTAGAAATCTTCCAAATGAGTTCTCATGCCTGAAA 843 0.4009 MHALIQEMGREIVRQESTKDPGRRSRLYDHKEVYDVLKNNMGTDAIEGISLDVSEIRGMNLSSDIFVKMINLRFLKFYSRSGARCNVSLPAGLESLSNKLRYLHWSAYPLKSLPTTFSPEKLVELYMPNSNVQRLWHGVQDLTNLKKMDLSCCEQLIELPDFSMATNLQTINLSRCVRLRHVHTSILSLKKLVNLNLVWCKRLKSLLSNVPLSSLRILELYGCSSLKEFSVTAAEMTYLDLRCTAINELPESVKYLSSLINLELSSCGNLRNLPNEFSCLK 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme9442g00001 281 Gene3D Ribonuclease Inhibitor 235 281 IPR032675 -
Trme9442g00001 281 Gene3D Ribonuclease Inhibitor 6 234 IPR032675 -
Trme9442g00001 281 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1 276 IPR044974 GO:0006952
Trme9442g00001 281 FunFam Disease resistance protein RPS4 43 234 - -
Trme9442g00001 281 Pfam Leucine Rich Repeat 121 140 IPR011713 -
Trme9442g00001 281 SUPERFAMILY L domain-like 50 280 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme9442g00001 Trme-Chr9442 1 1048 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme9442g00001 1 281 WRKY Transcription Factor Family AT4G12020 44.828 6.81e-61 206
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme9442g00001 - - mtr:25479456 497.664