Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme94355g00001 AAAATAGAGAAAATCATAAGGTCAGAAGAGAAAGATGAAGACACACATGAAGATTTTGAGCTTCCTATCTTTGATCAAGTTACAATACTCAAGGCAACAAATAACTTCTCTTTCAACAATAAGCTAGGTGAAGGTGGTTTCGGACCGGTATATAAGGGTATATTGCTTGATGGACAAGAAATTGCTGTCAAAAGACTATCAAAGAGTTCCGGACAAGGATCAMAAGAGTTTAAAAATGAAGTTATATTATGTGCTAAACTTCARCATCGAAATCTTGTTAAGGTTGTTGGTTGTTGTATTGAAGGAGATGAGAAAATGTTGATCTATGAATACATGTCGAATAATAGCCTCGATTCAGTTCTTTTTGGTGAGTAA 375 0.3413 KIEKIIRSEEKDEDTHEDFELPIFDQVTILKATNNFSFNNKLGEGGFGPVYKGILLDGQEIAVKRLSKSSGQGSXEFKNEVILCAKLQHRNLVKVVGCCIEGDEKMLIYEYMSNNSLDSVLFGE 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme94355g00001 124 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 1 111 - -
Trme94355g00001 124 Gene3D Phosphorylase Kinase; domain 1 2 111 - -
Trme94355g00001 124 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 8 122 - -
Trme94355g00001 124 ProSiteProfiles Protein kinase domain profile. 36 124 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme94355g00001 124 SUPERFAMILY Protein kinase-like (PK-like) 13 123 IPR011009 -
Trme94355g00001 124 Pfam Protein tyrosine and serine/threonine kinase 37 121 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme94355g00001 Trme-Chr94355 100 565 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme94355g00001 24 124 Receptor kinase-like Gene Family AT4G04500 65.347 2.10e-40 138
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Trme94355g00001 PK_Tyr_Ser-Thr 2.8e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme94355g00001 - - tpra:123915292 227.254