Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme942502g00001 ATGCGTATCATCAACGAACCCACTGCTGCTGCCCTTGCCTATGGCCTTCATATGGAGCCCATAGTTGATGATGCGAATATCGTTTTGATTTTCGACCTTGGAGGTGGTACTTTTGATGTCTCTCTTCTATCCATTGAAGATAGTGTCTTTCTAGTTAATGCCACTGCAGGAGACAGCCATCTTGGAGGTGAAGACTTCGATAACAGGATGGTTG 214 0.4533 MRIINEPTAAALAYGLHMEPIVDDANIVLIFDLGGGTFDVSLLSIEDSVFLVNATAGDSHLGGEDFDNRMV 71
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme942502g00001 71 ProSitePatterns Heat shock hsp70 proteins family signature 2. 30 43 IPR018181 -
Trme942502g00001 71 Gene3D Actin; Chain A, domain 4 62 71 - -
Trme942502g00001 71 Gene3D - 19 61 - -
Trme942502g00001 71 Pfam Hsp70 protein 1 71 IPR013126 GO:0005524|GO:0140662
Trme942502g00001 71 Gene3D - 1 18 - -
Trme942502g00001 71 SUPERFAMILY Actin-like ATPase domain 23 71 IPR043129 -
Trme942502g00001 71 PANTHER HEAT SHOCK PROTEIN 70KDA 1 71 IPR013126 GO:0005524|GO:0140662
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme942502g00001 Trme-Chr942502 16 229 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme942502g00001 1 71 Calmodulin-binding Proteins AT5G02500 73.239 1.27e-29 107