LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Trme9421g00001	GTTATTCGGGGAGAGAAAACAAGAAAGGCATATGCTGCTTTGCTTCAGAGACATAGAGCTGCGGTTATTATACAGAAGCAGATAAAAGCAGTGTTCGTAAGAAACAAAACAAGGACTATTAGAGATGCTACAATTGTTATACAATCAGACGCAGTACGGGTATCAGAATATGTATTTGACACCATGATATGCCGTTCCTTGAAAAATACAGGATATGATACTTTCATTCGTGGATGGTTGGTCAGAAGATGCTCAGGGGATATTGNNNNNNNNNNANNNNNNNNNNAGAAGACAAAAGAGTCGGATGAGATTCTGGTCAAGTCATCTTTCCTGGCTGAATTGCAGCGCCGAGTACTAAAGGCTGAAGCTGCCCTGAGAGAGAAAGATGAGGAAAATGACATCCTTAACCAACGTATCCAACAATATGAAAGCAGATNNNNNNNNNNANNNNNNNNNNANNNNNNNNNNANNNNNNNNNNANNNAAACAAATGAGATCCCTTCAATCTAGCCTCTCCATTGCTAAGAAGAGCCTTGCTATTGATGACTCTGAAAGAAATTCAGATGCATCTGTTAATGCAAGCGATGAGCGTGATTACAGCTGGGATGTGGGAAGTAATCACAGGCGCCAAGAAAGCAATGGGACACGATCAACGAGTGCTAGTTTGAGCGTTATAAGTCGGCTTACTGAAGAATTTGAGCAAAGGAGTCAAGTATTTGGTGATGATGCMAAGTTCTTGGTTGAGGTGAAATCTGGTCAAGCAGAAGCAAGTTTAAACCCGGATCAAGAACTTAGAAGATGGTGCACTTGA	810	0.3827	VIRGEKTRKAYAALLQRHRAAVIIQKQIKAVFVRNKTRTIRDATIVIQSDAVRVSEYVFDTMICRSLKNTGYDTFIRGWLVRRCSGDIXXXXXXXXKTKESDEILVKSSFLAELQRRVLKAEAALREKDEENDILNQRIQQYESRXXXXXXXXXXXXXXXXKQMRSLQSSLSIAKKSLAIDDSERNSDASVNASDERDYSWDVGSNHRRQESNGTRSTSASLSVISRLTEEFEQRSQVFGDDAKFLVEVKSGQAEASLNPDQELRRWCT	269

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Trme9421g00001	269	Coils	Coil	162	170	-	-
	Trme9421g00001	269	Coils	Coil	111	145	-	-
	Trme9421g00001	269	MobiDBLite	consensus disorder prediction	198	218	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Trme9421g00001	Trme-Chr9421	2	1735	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Trme9421g00001	2	266	Myosins gene family	AT1G50360	53.208	3.48e-76	249

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Trme9421g00001	-		-	gmx:100781736	343.199