Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme9416g00001 ATGTCAAGGCAAACCTCCCAGGCTACTGCTGCACAGATGAACCTTTTGCAACAACAGAGACTTTTGCAATATCAACAGCAGCAACAACAACTCTTAAAGGCTATGCCTCCGCAGCAACGGTCCCAGCTACCGCAGCAGTTTCAACAGCAGAATATGCCTGTAAGGTCTCCTGTGAAACCAGCATATGAACCTGGGATGTGTGCTAGGCGGCTGACACATTACATGTATCAGCAACAACATAGACCTGAAGATAACAACATCGATTTCTGGAGGAAATTTGTTGCAGAGTATTTTGCCCCTAATGCCAAAAAGAAGTGGTGTGTTTCCATGTATGGAAGTGGAAGACAAACGACTGGAGTTTTCCCTCAGGATATATGGCACTGTGAAATATGTAATCGCAAACCGGGCCGTGGGTTTGAGGCAACTGCTGAGGTTCTTCCCAGGCTTTTCAAAATAAAGTATGAAAGTGGTACTTTAGAAGAGCTACTGTATGTTGACATGCCTCGTGAATATCATAATTCCTCTGGCCAAATTGTTCTAGATTATGCAAAAGCAATTCAAGAAAGTGTTTTTGAGCAACTTCGCGTTGTTCGTGATGGTCAACTTCGAATAGTTTTCTCTCCAGACCTGAAGATATGCTCTTGGGAGTTTTGCGCTCGGCGCCATGAAGAGCTCATCCCCAGAAGATTGTTAATACCTCAGGTTAGTCAGCTTGGAGCAGTTGCTCAAAAATATCAGTCATGTACTCAAAATGCAGCAACCAATCTATC 770 0.439 MSRQTSQATAAQMNLLQQQRLLQYQQQQQQLLKAMPPQQRSQLPQQFQQQNMPVRSPVKPAYEPGMCARRLTHYMYQQQHRPEDNNIDFWRKFVAEYFAPNAKKKWCVSMYGSGRQTTGVFPQDIWHCEICNRKPGRGFEATAEVLPRLFKIKYESGTLEELLYVDMPREYHNSSGQIVLDYAKAIQESVFEQLRVVRDGQLRIVFSPDLKICSWEFCARRHEELIPRRLLIPQVSQLGAVAQKYQSCTQNAATNLS 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme9416g00001 257 PANTHER LIM DOMAIN-BINDING PROTEIN 7 256 IPR029005 -
Trme9416g00001 257 Pfam LIM-domain binding protein 70 247 IPR029005 -
Trme9416g00001 257 MobiDBLite consensus disorder prediction 34 55 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme9416g00001 Trme-Chr9416 1 1735 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme9416g00001 55 240 C2H2 Transcription Factor Family AT1G43850 90.860 1.59e-126 378
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme9416g00001 - - gmx:100787437 446.432