Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme94110g00001 ATGGATGTTGAAGCGTTGAAGAAGTTAAACAAAAACAAGAAACTGGTGAAGAAATTGGCAAAGCGTTACCAAGCCTTTTTAGCTTCTGAAGCTGTTATCAAGCAGATTCCCCGTCTTCTGGGTCCTGGTCTCAACAAGGCAGGCACGT 148 0.4392 MDVEALKKLNKNKKLVKKLAKRYQAFLASEAVIKQIPRLLGPGLNKAGT 49
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme94110g00001 49 Gene3D - 1 49 IPR016095 -
Trme94110g00001 49 Pfam Ribosomal protein L1p/L10e family 2 48 IPR028364 -
Trme94110g00001 49 SUPERFAMILY Ribosomal protein L1 1 48 IPR023674 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme94110g00001 Trme-Chr94110 226 373 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme94110g00001 1 48 Cytoplasmic Ribosomal Protein Gene Family AT1G08360 91.667 7.71e-13 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme94110g00001 K02865 - tcc:18590320 74.7146