Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme9403g00001 ATGGGGGGCATAGGTAAGACAACCCTTGCTGCTGCTATGTTTCAAAGGGTCTCCTCCAAGTTTGAAGGCACCTGCTTCTTTGAAAATGTGACCGAAGAATCAAAAAGGCATGGAATCAATTACACATGCAACAAACTTCTTTCCAAGTTACTAAAGGAAGATCTTGATATTGACACTTCTAAAGTAATACCATCTATGATCGTTAGAAGACTCAAACACATGAAATCTTTCATTGTGCTAGATGATGTGCATACTTCAAAACTTCTGCAAAACTTGATTGGAGTTGGACGTGGTTGGCTAGGAGTTGGTAGCACAATTATTGTGACGACAAGAGATAAGCATGTACTGATAAGTGGAGGAATTGACAAAATTCATGAAGTTAAGAAGATGAACTCCCAAAACTCCCTCCAACTTTTCAGCTTGAATGCTTTTAACAAAGTCTTGCCTAAGGAGGGATACACCGAGCTCTCAAAGAAAGCAATTGATTACGCCAAAGGAAACCCTTTAGCTGTGAAAGTATTGGGATCACTTTTATGTTGTAAAAGTGAAATAGAATGGAACTGTGCATTAGCTAAACTGAAGAAAATTCCCAATACAGAAATTGATGGGATACTGAGATGGAGTTATAATGAATTGGACGAACAAGAGAAAGATATATTTCTAGACATTGCATGCTTTTTCAAAGGACATGAAAGGCATAAGGTAACAAAAATATTAAATGAGTGTGGTTTCTTTGCAGATATAGGGATAAAACATCTTTTAGACAAGGCTCTTATAAGAGTTGACATTGAAAATTGCATACAAATGCATGACTTGATACAAGAAATGGGAAAACAAATTGTTCGCGAACAATCTCTTAAAAATCCCGGACAACGCAGTAGATTATGGGATCCTAAGGAAGTGTACGACGTATTGAAAAATAATAGAGTAAGATAA 936 0.3665 MGGIGKTTLAAAMFQRVSSKFEGTCFFENVTEESKRHGINYTCNKLLSKLLKEDLDIDTSKVIPSMIVRRLKHMKSFIVLDDVHTSKLLQNLIGVGRGWLGVGSTIIVTTRDKHVLISGGIDKIHEVKKMNSQNSLQLFSLNAFNKVLPKEGYTELSKKAIDYAKGNPLAVKVLGSLLCCKSEIEWNCALAKLKKIPNTEIDGILRWSYNELDEQEKDIFLDIACFFKGHERHKVTKILNECGFFADIGIKHLLDKALIRVDIENCIQMHDLIQEMGKQIVREQSLKNPGQRSRLWDPKEVYDVLKNNRVR 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme9403g00001 311 SUPERFAMILY "Winged helix" DNA-binding domain 200 306 IPR036390 -
Trme9403g00001 311 Pfam NB-ARC domain 1 211 IPR002182 GO:0043531
Trme9403g00001 311 Gene3D - 129 213 IPR042197 -
Trme9403g00001 311 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1 305 IPR044974 GO:0006952
Trme9403g00001 311 Gene3D - 1 120 IPR027417 -
Trme9403g00001 311 PRINTS Disease resistance protein signature 164 178 - -
Trme9403g00001 311 PRINTS Disease resistance protein signature 70 84 - -
Trme9403g00001 311 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 223 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme9403g00001 Trme-Chr9403 339 1274 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme9403g00001 1 307 WRKY Transcription Factor Family AT5G45050 37.338 2.06e-58 200
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme9403g00001 - - mtr:25501083 515.768