Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme93977g00001 ATGTCATCTTATCTATTATTTGGACTTTCTAGGAAAATTATCGGTGCACGATTCTATTCAAAAGGGTTTGAAGCAGAAACTGGTCCTTTAGACGATGTTGTCAACAAGATTTTCTTCAGGTCAGCTAGAGACAGTGATGGACATGGAACACACACAGCTTCAACAATTGCAGGATCTGTTGTTGTTGATGCTAGCTTACTTGGCATTGCCAAAGGAACAGCTAGAGGCGGTGCTCCAAGTGCAAGACTTGCCATCTACAAGGCCTGTTGGTTTGGATTTTGCAGTGATGCCGATGTTCTTTCTGCTATCGATGATGCCATTCATGACGGTGTTGACATAATTTCTCTTTCTCTTGGTCCTACTCCTCCACAGCCGATTTACTTTGAGAACGCAATCAGTGTTGGAGCATTCCATGCATTCCAAAAGGGAATTCTTGTTTCTGCTTCAGCTGGAAACTCGGTTTTTCCTGGCACTGCATGCAATGTTGCTCCTTGGATCCTCACTGTTGCTGCTAGTACGATAGACAGAGAATTCAGTTCAAATATCTACCTCGGTAACTCAAAAGTTTTGAAG 573 0.4293 MSSYLLFGLSRKIIGARFYSKGFEAETGPLDDVVNKIFFRSARDSDGHGTHTASTIAGSVVVDASLLGIAKGTARGGAPSARLAIYKACWFGFCSDADVLSAIDDAIHDGVDIISLSLGPTPPQPIYFENAISVGAFHAFQKGILVSASAGNSVFPGTACNVAPWILTVAASTIDREFSSNIYLGNSKVLK 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme93977g00001 191 Pfam Subtilase family 41 173 IPR000209 GO:0006508|GO:0008236
Trme93977g00001 191 ProSiteProfiles Serine proteases, subtilase domain profile. 1 191 - -
Trme93977g00001 191 SUPERFAMILY Subtilisin-like 34 188 IPR036852 GO:0004252|GO:0006508
Trme93977g00001 191 Gene3D Peptidase S8/S53 domain 3 188 IPR036852 GO:0004252|GO:0006508
Trme93977g00001 191 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 10 187 IPR045051 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme93977g00001 Trme-Chr93977 100 672 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme93977g00001 10 188 Subtilisin-like Serine Gene Family AT5G67360 53.333 3.26e-55 184
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme93977g00001 - - gmx:100792672 331.257