Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme93974g00001 ATGAAACTCGAAGACCTTAAACTTCGTCGCGGTGAAGCTATTGCTGTGAATTTCGCTATGATGCTGCACCATGTACCGGATGAAAATGTACATGGTGGTCAGAATCATCGCGATCGGTTGGTGAGACTGGTGAAATGTTTGTCTCCTAAGGTAGTGACTCTTGTTGAGCAAGAATCGAATACCAACGAGCTTCCATTCTTGCCACGTTTCGTTGAGACAATGAACTACTACTTGGCGGTTTTTGAATCAATTGATGTTTCTTTGCCAAGGGAGCACAGAGAAAGGATTAATGTGGAACAGCATTGTTTGGCTCGC 315 0.4413 MKLEDLKLRRGEAIAVNFAMMLHHVPDENVHGGQNHRDRLVRLVKCLSPKVVTLVEQESNTNELPFLPRFVETMNYYLAVFESIDVSLPREHRERINVEQHCLAR 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme93974g00001 105 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 3 105 IPR005202 -
Trme93974g00001 105 ProSiteProfiles GRAS family profile. 1 105 IPR005202 -
Trme93974g00001 105 Pfam GRAS domain family 2 105 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme93974g00001 Trme-Chr93974 1 315 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme93974g00001 2 105 GRAS Transcription Factor Family AT5G48150 72.115 1.36e-48 159
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Trme93974g00001 GRAS 7.7e-32 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme93974g00001 - - cam:101502619 184.111