Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme9395g00001 AGTAAGAAATATGAACACTTGCTTAAACTTGAAAGAGCTACTGAGAACCTTACACTTTTCGAAGCAGATATATTGAATTATGAATCTGTTTACAAAGCAATTGTCGGATGCACTGCCGTTTTCCATGTTGCAAGCCCTGTACCTTCAACAGTTGTACCAAATCCTGAGGTGGAAGTGATTGAGCCTGCAGTGAAGGGAACTGCTAATGTACTTGAAGCTTCTCTTAAAGCTAAAGTGGAACGTGTCGTCTTTGTATCATCTGGAGCTGCTGTTGCTATCAATCCTAATTTCTCGGAAGATAAAGTGATTGACGAGTCTTGTTGGTCTGACAAAGACTATTGCAAAAAAACTAAGGTCACTAAGATTTTATTACATTACATGTGTGCATGA 390 0.3872 SKKYEHLLKLERATENLTLFEADILNYESVYKAIVGCTAVFHVASPVPSTVVPNPEVEVIEPAVKGTANVLEASLKAKVERVVFVSSGAAVAINPNFSEDKVIDESCWSDKDYCKKTKVTKILLHYMCA 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme9395g00001 129 Pfam 3-beta hydroxysteroid dehydrogenase/isomerase family 10 107 IPR002225 GO:0003854|GO:0006694|GO:0016616
Trme9395g00001 129 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 7 123 - -
Trme9395g00001 129 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 5 119 IPR036291 -
Trme9395g00001 129 Gene3D - 1 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme9395g00001 Trme-Chr9395 675 1752 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme9395g00001 1 118 Monolignol Biosynthesis Gene Families AT2G33590 59.322 2.41e-46 150
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme9395g00001 - - lja:Lj3g3v2171530.3 196.438