Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme93953g00001 ATGTTAGCAGTAGGAAGGAAAAAGGTGAGCAAAGCACCAAAGATTCAGCGCCTGGTCACACCCCTGACACTTCAAAGAAAGAGGGCAAGAATTGCTGATAAGAAGAAAAGAATTGCCAAAGCTAAATCAGAGGCAGCAGAATACCAGAAACTTCTTGCATCCAGGTTGAAGGAGCAAAGGGAACGACGTAGTGAGAGTTTGGCTAAGAAGAGATCAAGGCTCTCCACCGCAAAGCAAGGTGTCACAGCATAG 252 0.4603 MLAVGRKKVSKAPKIQRLVTPLTLQRKRARIADKKKRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRLSTAKQGVTA 83
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme93953g00001 83 MobiDBLite consensus disorder prediction 57 83 - -
Trme93953g00001 83 MobiDBLite consensus disorder prediction 57 72 - -
Trme93953g00001 83 PANTHER 40S RIBOSOMAL PROTEIN S6 7 74 IPR001377 GO:0003735|GO:0005840|GO:0006412
Trme93953g00001 83 Coils Coil 24 51 - -
Trme93953g00001 83 Gene3D - 1 76 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme93953g00001 Trme-Chr93953 32 551 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme93953g00001 7 77 Cytoplasmic Ribosomal Protein Gene Family AT5G10360 92.958 1.30e-38 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme93953g00001 K02991 - sind:105176438 108.227