Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme93811g00001 TATATTGGGACTTCAATTAACGATGGTCCGGGATGCTTGATGCTGAGATGTCCTGATCCCGCTTGTGGTGCTGCTGTTGATCAAGATATGATTAATCTKTTAGCATCCGATGAAGATAAAGAGAAGTATGATCGTTACCTTCTTAGATCTTACATTGAAGACAATAAGAAGGTATGTTGTAGAGATTCAACTTAG 195 0.3846 YIGTSINDGPGCLMLRCPDPACGAAVDQDMINLLASDEDKEKYDRYLLRSYIEDNKKVCCRDST 64
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme93811g00001 64 SUPERFAMILY RING/U-box 1 53 - -
Trme93811g00001 64 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1 56 IPR013083 -
Trme93811g00001 64 ProSiteProfiles TRIAD supradomain profile. 1 64 IPR044066 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme93811g00001 Trme-Chr93811 367 561 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme93811g00001 1 58 C3H Transcription Factor Family AT2G31510 72.414 1.35e-25 95.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme93811g00001 K11968 - lja:Lj0g3v0321849.1 118.242