Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme938012g00001 GCGACGGAGCGTCAATCCAAGAGTTGGAGCATCCATACCCGATCGGAGATCATCGCCAAGTATCAAATCATGGAACGAATCGGCTCCGGAGCTTACGCCGATGTCTACCGTGGCCGTCGTCTCTCCGACGACCTAACAGTTGCTCTCAAGGAAATCCATGACTACCAATCCGCCTTCCGAGAAATCGAAGCATTGCAAATGCTTCAAGGTTCTCCAAACGTCGTCGTC 228 0.5263 ATERQSKSWSIHTRSEIIAKYQIMERIGSGAYADVYRGRRLSDDLTVALKEIHDYQSAFREIEALQMLQGSPNVVV 76
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme938012g00001 76 FunFam Cyclin-dependent kinase F-1 12 76 - -
Trme938012g00001 76 ProSiteProfiles Protein kinase domain profile. 21 76 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme938012g00001 76 ProSitePatterns Protein kinases ATP-binding region signature. 27 50 IPR017441 GO:0005524
Trme938012g00001 76 Gene3D Phosphorylase Kinase; domain 1 12 76 - -
Trme938012g00001 76 SUPERFAMILY Protein kinase-like (PK-like) 9 75 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme938012g00001 Trme-Chr938012 2 229 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme938012g00001 3 76 Core Cell Cycle Gene Families AT4G28980 77.027 2.08e-34 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme938012g00001 - - gmx:100801952 134.035