Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme937678g00001 GCCGGGAGTACGGTTGGAGGGATTAAGGAGACTCAAGAAATGATTGATTTTGCTGCCAAACATGGCGTTAAACCTGATATCGAGATTGTTCCTATTGATTATGTCAACACAGCAATGGAACGTCTCGCTAAAGCCGATGTGAAATATCGATTTGTGATTGATATCGGAAACACATTGAAAGAAAGTTCTTAA 192 0.401 AGSTVGGIKETQEMIDFAAKHGVKPDIEIVPIDYVNTAMERLAKADVKYRFVIDIGNTLKESS 63
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme937678g00001 63 FunFam Putative cinnamyl alcohol dehydrogenase 6 26 55 - -
Trme937678g00001 63 PANTHER ALDEHYDE REDUCTASE 1 58 IPR047109 GO:0016616
Trme937678g00001 63 Gene3D - 1 25 - -
Trme937678g00001 63 Gene3D - 26 55 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme937678g00001 Trme-Chr937678 2 193 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme937678g00001 2 60 Monolignol Biosynthesis Gene Families AT4G37990 72.881 1.35e-25 94.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme937678g00001 K23232 - gmx:100809071 117.087