Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme93712g00001 ATGGCATTATGGCAGGTTATGGTGGGGCTTATGATAGAGTCAGCACAGCCATTACTATTAAAATGGGAGCAACTTATTGAGGACCAAGGAGGGGTCACAGCTGAAGTTAAAGTTGATGCTGATTTGAGGGGCTTTTCAGCTGATGTTATTTCAAGAGTTTGTTTTGGACATTCTTATTCTAAGGGAAAAGAAGTTTTCTTAAAGCTTAGAAGCATCCAAAAGATCATGTCCAACCATGGCTTCCTTTTTGACAAGAGTGGTTTCCTAGACAAACTGAAATTTCGGACAAAGAAGCAAAATGAGATAAGCAATTTAGAGAAAGAGATAGAGTCACTGATATGGGAGTTAGTTGAGGAACGGAAGCGAGAATCCTCGTCAGAAAAGGATTTGATGCAGTTACTTCTGGAAGCAGCAATGAGTGATCAAAGTTTAGGGAAGGACTTTTCGAAGCAATTCATTGTGGATAACTGCAAAAACATATACTTTGCTGGTCATGAAACAACTGCTGTTGCAGCTTCTTGGTGTTTGATGCTTCTCGCTTTATACCCCGAATGGCAAACTCGT 564 0.4025 MALWQVMVGLMIESAQPLLLKWEQLIEDQGGVTAEVKVDADLRGFSADVISRVCFGHSYSKGKEVFLKLRSIQKIMSNHGFLFDKSGFLDKLKFRTKKQNEISNLEKEIESLIWELVEERKRESSSEKDLMQLLLEAAMSDQSLGKDFSKQFIVDNCKNIYFAGHETTAVAASWCLMLLALYPEWQTR 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme93712g00001 188 PRINTS E-class P450 group I signature 152 169 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme93712g00001 188 PRINTS E-class P450 group I signature 172 188 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme93712g00001 188 PRINTS E-class P450 group I signature 45 63 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme93712g00001 188 Coils Coil 95 122 - -
Trme93712g00001 188 Gene3D Cytochrome P450 2 188 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme93712g00001 188 PANTHER CYTOCHROME P450 FAMILY MEMBER 5 188 - -
Trme93712g00001 188 SUPERFAMILY Cytochrome P450 5 188 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme93712g00001 188 Pfam Cytochrome P450 8 188 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme93712g00001 Trme-Chr93712 1 693 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme93712g00001 7 188 Cytochrome P450 AT5G24910 56.842 2.18e-65 204
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme93712g00001 K20661 - gmx:100815776 296.589