Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme936869g00001 CAGGAGTTTTTCAAGGGGAAGGAATTATGCAAGAACATCAATCCTGATGAGGCTGTTGCTTTTGGTGCAGCTGTCCAGGCTGCTATTTTGAGTGACGACATTAAGAATGTTCCAAAATTGGTGTTGGAAGATGTTACACCTTTGTCACTTGGTATCAAAGCACTTGGGGATATTATGAGTGTGGTGATTCCTAGGAATACTACTATTCCTGTTAAGAAGACAAGAAC 227 0.4097 QEFFKGKELCKNINPDEAVAFGAAVQAAILSDDIKNVPKLVLEDVTPLSLGIKALGDIMSVVIPRNTTIPVKKTRT 76
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme936869g00001 76 PRINTS 70kDa heat shock protein signature 13 33 - -
Trme936869g00001 76 PRINTS 70kDa heat shock protein signature 39 58 - -
Trme936869g00001 76 Pfam Hsp70 protein 2 75 IPR013126 GO:0005524|GO:0140662
Trme936869g00001 76 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 36 76 IPR029047 -
Trme936869g00001 76 Gene3D - 14 26 - -
Trme936869g00001 76 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 27 76 IPR029047 -
Trme936869g00001 76 SUPERFAMILY Actin-like ATPase domain 1 31 IPR043129 -
Trme936869g00001 76 PANTHER HEAT SHOCK PROTEIN 70KDA 1 74 IPR013126 GO:0005524|GO:0140662
Trme936869g00001 76 Gene3D - 1 13 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme936869g00001 Trme-Chr936869 3 229 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme936869g00001 1 75 Calmodulin-binding Proteins AT3G12580 67.105 5.78e-28 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme936869g00001 K03283 - tpra:123896225 119.398