Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme93665g00001 ATGACTAGACTTCAAAAGATGAAAACTTCACATGATGATTCATTATTGAAAATTGATAGAATCTCTGACATTGTTGGCATTGATGAAGTTCCTAGCTTAGATGAACATAACCAAGAGACTTGGCATGTCCAGATCTTCCGTTCGATTGATTCCAATTCTGTGAAAGGATTTCCGAAAGAACCGAAAGACGCTATACAAAGGAACTTGGTTTGTGGAAAGAATGTAATGATAGACATGAGCATACATTCTGCATATGTCAAAGCAATCAGAGCAGCACAGAAGTTCATTTATATCGAGAACCAATATTTTCTAGGCTCATCATATAATTGGGATTCATACAAAGACCTCG 349 0.3639 MTRLQKMKTSHDDSLLKIDRISDIVGIDEVPSLDEHNQETWHVQIFRSIDSNSVKGFPKEPKDAIQRNLVCGKNVMIDMSIHSAYVKAIRAAQKFIYIENQYFLGSSYNWDSYKDL 116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme93665g00001 116 SUPERFAMILY Phospholipase D/nuclease 58 112 - -
Trme93665g00001 116 PANTHER PHOSPHOLIPASE D 8 115 IPR015679 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme93665g00001 Trme-Chr93665 61 605 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme93665g00001 4 116 Phospholipase D Gene Family (Wang group) AT2G42010 72.566 1.07e-56 186
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme93665g00001 K01115 - gmx:100786241 213.772