Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme93651g00001 CAACCTTCGTTTCGAAATATCTATAGCAATGGGAACGTTGGAGGAAGCACCATGAAGCCGCCTTTAGGAGGAGGTCATTTAGATTCGGCACAGCCCATAAGTGCTCAAATAGTTTTTAGTTATGAGATGGTAATGGAAATAACCAATGCATTTTCACATCAAAATGTGATAGGGCAAGGAGGATTTGGGTGTGTTTACAAGGGTAGGCTGCGGGACGGAAAAGAAGTGGCGGTCAAGACTCTTAAGGCTGGTAGTGGGCAGGGAGATAGGGAATTTAGGGCTGAAGTTGAGATCATTAGCCGTGTTCATCATCGACATTTGGTATCGTTGGTTGGTTATTGCATATCAGAGCAGCAAAGAGTGCTTATCTATGAGTTCCTCCCAAATGGAAATCTTCATCATCACTTGCATGGTAATGTGAGTTTCCCTTTTTTCCTTATAAAAATTAAGTAA 453 0.4216 QPSFRNIYSNGNVGGSTMKPPLGGGHLDSAQPISAQIVFSYEMVMEITNAFSHQNVIGQGGFGCVYKGRLRDGKEVAVKTLKAGSGQGDREFRAEVEIISRVHHRHLVSLVGYCISEQQRVLIYEFLPNGNLHHHLHGNVSFPFFLIKIK 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme93651g00001 150 SUPERFAMILY Protein kinase-like (PK-like) 29 141 IPR011009 -
Trme93651g00001 150 ProSiteProfiles Protein kinase domain profile. 51 150 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme93651g00001 150 FunFam Proline-rich receptor-like protein kinase PERK8 25 126 - -
Trme93651g00001 150 Gene3D Phosphorylase Kinase; domain 1 26 126 - -
Trme93651g00001 150 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 35 139 IPR047117 -
Trme93651g00001 150 ProSitePatterns Protein kinases ATP-binding region signature. 57 79 IPR017441 GO:0005524
Trme93651g00001 150 Pfam Protein tyrosine and serine/threonine kinase 54 139 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme93651g00001 Trme-Chr93651 71 523 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme93651g00001 25 138 Trihelix Transcription Factor Family AT1G23540 71.053 4.79e-51 168
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Trme93651g00001 PK_Tyr_Ser-Thr 3.7e-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme93651g00001 - - vun:114178585 188.734