Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme93626g00001 ATGGATATGAAAGCATCAAAAGAATTTCTTGCTGAGCTTAAGGTGTTGACGCGTGTTCATCACTTGAACCTGGTACGGTTGATTGGATATTGCGTCGAGGGATCCCTTTTTCTTGTCTATGAATACATTAATAATGGAAACTTAAGCCAACATCTACGCAGTTCAGATGGAGAACCTTTGCAATGGTCTACTAGGACTAAAATTGCTCTGGATTCAGCTAGAG 223 0.4036 MDMKASKEFLAELKVLTRVHHLNLVRLIGYCVEGSLFLVYEYINNGNLSQHLRSSDGEPLQWSTRTKIALDSAR 74
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme93626g00001 74 Gene3D Transferase(Phosphotransferase) domain 1 1 74 - -
Trme93626g00001 74 Pfam Protein tyrosine and serine/threonine kinase 4 73 IPR001245 GO:0004672|GO:0006468
Trme93626g00001 74 SUPERFAMILY Protein kinase-like (PK-like) 3 73 IPR011009 -
Trme93626g00001 74 ProSiteProfiles Protein kinase domain profile. 1 74 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme93626g00001 74 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 1 74 IPR044812 GO:0019199|GO:0045087
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme93626g00001 Trme-Chr93626 79 564 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme93626g00001 1 74 Receptor kinase-like Gene Family AT3G21630 79.730 1.78e-37 129
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Trme93626g00001 PK_Tyr_Ser-Thr 2.1e-13 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme93626g00001 - K13429 egr:104435173 133.265