Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme936124g00001 TCTGACTTGCCTAATCGGCTCGACCGGATGTTGCGCTTGCTTGCTAGCCACTCTCTTTTGTCCATTTCCACTCGGACCAATGATGATGATGGTAGCTTGGTGAGAGTTTATGGTCTCACACCATCTGGTGAATACTTTGTTAATGGTGAAAATGATTGTGGCTATCTGGGTTCAATGGCATCATATTTGTCTCACCCTGCTTTTTCAGGGGTGTGGTAA 219 0.4566 SDLPNRLDRMLRLLASHSLLSISTRTNDDDGSLVRVYGLTPSGEYFVNGENDCGYLGSMASYLSHPAFSGVW 72
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme936124g00001 72 SUPERFAMILY "Winged helix" DNA-binding domain 4 50 IPR036390 -
Trme936124g00001 72 Gene3D - 1 72 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme936124g00001 Trme-Chr936124 1 219 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme936124g00001 7 72 Monolignol Biosynthesis Gene Families AT1G33030 33.333 7.83e-08 45.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme936124g00001 - - gmx:100798295 93.9745