Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Trme93544g00001 | ATGGCCATACTCAAATTACTATTGGAAGATGGTAATGATAATGAAAAGATTTCTGTGATCCCCATTGTTGGCATGGGTGGGGTGGGAAAAACCGCTTTGGCCCAATCTGTGTTCAACCATGACAGTATAAAACATAAATTTGATGTTCAAGCATGGGTTTGTGTATCCGATGATTTCAATGAATTCAAGGTAACAAAGGACATCGTGGAAGCAGTTACTAGAAGTGCTTGTAATATAAATAACAAAGAGTTGCTTCATCTTGATTTGAAGGAAAAACTATCTGGAAAAAAGTTCTTAATTGTTTTGGATGATGTCTGGACCGAGGATTATGACAGTTGGAATTCTCTTTTAAGGCCTCTTCAATATGGTAACAAGGGAAGTATAATTCTTGTAACAACCCGTATTGAAAAAGTTGCATCTATGGTCCAAACTTTTCAAACTTACCATCTTGAGCAATTGTCTGATGAAGATTGTTGGTCAGTGTTTGCAAACCGTGCTTGCTTTTCTCCAAAAGAATCCACTGAGAATATGGATCTCCACAAAATTGGCAAAGAGATTGTCAGAAAATGTAAGGGATTGCCTTTAGCAGCGCAATCACTTGGC | 603 | 0.3765 | MAILKLLLEDGNDNEKISVIPIVGMGGVGKTALAQSVFNHDSIKHKFDVQAWVCVSDDFNEFKVTKDIVEAVTRSACNINNKELLHLDLKEKLSGKKFLIVLDDVWTEDYDSWNSLLRPLQYGNKGSIILVTTRIEKVASMVQTFQTYHLEQLSDEDCWSVFANRACFSPKESTENMDLHKIGKEIVRKCKGLPLAAQSLG | 201 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Trme93544g00001 | 201 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 3 | 201 | IPR027417 | - | |
| Trme93544g00001 | 201 | Gene3D | - | 1 | 148 | IPR027417 | - | |
| Trme93544g00001 | 201 | PANTHER | DISEASE RESISTANCE PROTEIN RP | 7 | 201 | IPR044974 | GO:0006952 | |
| Trme93544g00001 | 201 | Pfam | NB-ARC domain | 3 | 201 | IPR002182 | GO:0043531 | |
| Trme93544g00001 | 201 | Gene3D | - | 152 | 201 | IPR042197 | - | |
| Trme93544g00001 | 201 | PRINTS | Disease resistance protein signature | 19 | 34 | - | - | |
| Trme93544g00001 | 201 | PRINTS | Disease resistance protein signature | 92 | 106 | - | - | |
| Trme93544g00001 | 201 | PRINTS | Disease resistance protein signature | 190 | 201 | - | - | |
| Trme93544g00001 | 201 | FunFam | Probable disease resistance protein At1g61300 | 2 | 146 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Trme93544g00001 | Trme-Chr93544 | 1 | 603 | Dispersed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Trme93544g00001 | 17 | 201 | WRKY Transcription Factor Family | AT5G45050 | 26.316 | 1.35e-10 | 58.2 |