Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme93508g00001 ATGGATGTTAATGTGAGTGCATGGGGCCCTAAATCTAAAGGGGTGACCCCTCTCCACCTTGCTGCGGAAGGTGGTCACCTCGGAGTGATGGATGAACTGCTTGAGCGTGGTGCCAATATTGATGCCAGAACTAAGGGTGCTTGTGGCT 148 0.527 MDVNVSAWGPKSKGVTPLHLAAEGGHLGVMDELLERGANIDARTKGACG 49
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme93508g00001 49 ProSiteProfiles Ankyrin repeat region circular profile. 13 45 - -
Trme93508g00001 49 SUPERFAMILY Ankyrin repeat 12 44 IPR036770 -
Trme93508g00001 49 Gene3D - 2 49 IPR036770 -
Trme93508g00001 49 SMART ANK_2a 13 42 IPR002110 GO:0005515
Trme93508g00001 49 Pfam Ankyrin repeat 14 45 IPR002110 GO:0005515
Trme93508g00001 49 ProSiteProfiles Ankyrin repeat profile. 13 45 IPR002110 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme93508g00001 14 45 MAP Kinase Kinase Kinase AT2G43850 62.500 7.76e-07 41.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme93508g00001 - - aprc:113868977 100.908