Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme93489g00001 ATGGAGAAGGAGGAAGATGTGAAGGTTGGAGCAAACAAATTCTCAGAGAGACAGCCATTAGGGACAGCAGCTCAAAGCGACATCAAAGACTACAAAGAAGCACCACCAGCTCCATTATTTGAGCCTGGTGAGCTCAAATCATGGTCTTTTTACAGAGCTGGAATTGCTGAGTTCATAGCTACTTTCTTGTTCTTGTACATTACCATTTTGACTGTAATGGGTGTTAACAGATCAACCTCCAAATGTTCCTCTGTTGGCATTCAAGGTATTGCTTGGTCTTTTGGGGGTATGATCTTTGCTCTTGTTTACTGCACTGCTGGAATTTCAG 328 0.4268 MEKEEDVKVGANKFSERQPLGTAAQSDIKDYKEAPPAPLFEPGELKSWSFYRAGIAEFIATFLFLYITILTVMGVNRSTSKCSSVGIQGIAWSFGGMIFALVYCTAGIS 109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme93489g00001 109 SUPERFAMILY Aquaporin-like 44 109 IPR023271 -
Trme93489g00001 109 PRINTS Major intrinsic protein family signature 94 109 IPR000425 GO:0015267|GO:0016020|GO:0055085
Trme93489g00001 109 PRINTS Major intrinsic protein family signature 52 71 IPR000425 GO:0015267|GO:0016020|GO:0055085
Trme93489g00001 109 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 11 109 IPR034294 -
Trme93489g00001 109 Pfam Major intrinsic protein 44 109 IPR000425 GO:0015267|GO:0016020|GO:0055085
Trme93489g00001 109 Gene3D Glycerol uptake facilitator protein. 37 109 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme93489g00001 Trme-Chr93489 136 463 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme93489g00001 3 109 Major Intrinsic Protein MIP AT4G00430 85.047 5.48e-65 194
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme93489g00001 K09872 - mof:131164814 200.675