Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme93357g00001 ATGAAAGGAAGGGTAGATGAAAATTACATTAACGCACTCAATTATTTGAAATTAGTTGTCAAAGAAACCCTGAGGTTACACCCTCCAGCTCCTCTTTTGCTACCAAGAGAATGTGGTCAAGCATGCGAGATAAATGGTTATAAAATACCGATTAAGAGTAAGGTGATAGTCAATGCTTGGGCAATTGCAAGAGATCCAAACTATTGGACTGAACCAGAAAGATTTTATCCAGAGAGATTCATTGATAGTGATATTGACTATAAAGGGGGTAATTTTGAGTACATTCCTTTTGGTGCCGGAAGAAGAATATGCCCAGGGAGCTCATTTGGTTTGAGAAATATTGAGTTGGCCCTTGCGATGTTGTTGTATCATTTTGACTGGATGCTTCCAAGTGGAACCAGAAGTGAAAAATTGGACATGACAGAGGAATTTGGAGTCACAGTGAGAAGAAAAGACGATCTTTTATTGTTTCCTGTTGTTTATCATCCTTTGAATGTCACATGA 504 0.3829 MKGRVDENYINALNYLKLVVKETLRLHPPAPLLLPRECGQACEINGYKIPIKSKVIVNAWAIARDPNYWTEPERFYPERFIDSDIDYKGGNFEYIPFGAGRRICPGSSFGLRNIELALAMLLYHFDWMLPSGTRSEKLDMTEEFGVTVRRKDDLLLFPVVYHPLNVT 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme93357g00001 167 Pfam Cytochrome P450 6 151 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme93357g00001 167 SUPERFAMILY Cytochrome P450 4 157 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme93357g00001 167 FunFam Os06g0641800 protein 62 156 - -
Trme93357g00001 167 Gene3D Cytochrome P450 2 156 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme93357g00001 167 PRINTS P450 superfamily signature 18 29 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme93357g00001 167 PRINTS P450 superfamily signature 95 104 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme93357g00001 167 PRINTS P450 superfamily signature 104 115 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme93357g00001 167 PRINTS E-class P450 group I signature 58 82 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme93357g00001 167 PRINTS E-class P450 group I signature 17 35 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme93357g00001 167 PRINTS E-class P450 group I signature 94 104 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme93357g00001 167 PRINTS E-class P450 group I signature 104 127 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme93357g00001 167 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 97 106 IPR017972 GO:0005506|GO:0016705
Trme93357g00001 167 PANTHER OS08G0105600 PROTEIN 2 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme93357g00001 Trme-Chr93357 34 537 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme93357g00001 4 162 Cytochrome P450 AT3G26230 55.975 8.05e-59 189
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme93357g00001 - - tpra:123912942 298.13