Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme93030g00001 ATGGACATTGTAGCAAAGCTGTTGGCGGTTTCACAACATAGACCACGCGCTTTATGCATCTTGTCGGGAACTGGCACTGTATCTTCAGTCACATTGCGCCAGCCTGCTTCTACTAGTGTTAGTGTTACATATGAGGGGCGATTCCAAATATTATGCTTATCTGGTTCTTACTTGGTTGCTGAAGATGGTGG 191 0.4555 MDIVAKLLAVSQHRPRALCILSGTGTVSSVTLRQPASTSVSVTYEGRFQILCLSGSYLVAEDGG 64
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme93030g00001 64 SUPERFAMILY AF0104/ALDC/Ptd012-like 2 60 - -
Trme93030g00001 64 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 2 64 IPR039605 GO:0003680
Trme93030g00001 64 CDD DUF296 2 63 IPR005175 -
Trme93030g00001 64 ProSiteProfiles PPC domain profile profile. 1 64 IPR005175 -
Trme93030g00001 64 Gene3D - 1 64 - -
Trme93030g00001 64 Pfam Plants and Prokaryotes Conserved (PCC) domain 2 59 IPR005175 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme93030g00001 2 64 AT-hook Motif Nuclear Localized (AHL) Family AT1G63470 74.603 3.19e-28 101
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme93030g00001 - - qsu:112036449 115.931