Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme92997g00001 ATGATAGATGAAGCATTAGATTTTGTGAACGCCGTAAGCATAGTGTTTGCAGATGATAGGGAAAAGTATGATGAGTTTCTTACCATCCTAAAGGATGCCCGGAACGTGACTGATTTAAGAGGTATAATAGCAAGAATGGAGGAGCTGCTTAAAGG 155 0.4 MIDEALDFVNAVSIVFADDREKYDEFLTILKDARNVTDLRGIIARMEELLKG 52
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme92997g00001 52 ProSiteProfiles PAH domain profile. 1 52 IPR003822 GO:0006355
Trme92997g00001 52 SUPERFAMILY PAH2 domain 2 52 IPR036600 GO:0006355
Trme92997g00001 52 Gene3D Paired amphipathic helix 4 52 IPR036600 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme92997g00001 Trme-Chr92997 454 608 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme92997g00001 4 52 WRKY Transcription Factor Family AT4G12020 44.000 1.60e-07 43.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme92997g00001 K11644 - tpra:123897850 75.8701