Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme92897g00001 ATGATGAAGATCACGGAGAAGAGCGACGTTTATAGCTACGGTGTAGTTTTGCTAGAAGTCTTGACTGGCAAGCAACCAATAGATCCAACAATACCAGATGGTTTACATGTTGTTGATTGGGTGAGACAGAAAAGAGGTCTTGAAGTACTTGATCCTACCTTACTTTCAAGACCGGAATCGGAAATAGAAGAAATGATCCAAGCATTGGGGATAGCTCTATTGTGTGTAAATTCATCTCCTGATGAAAGACCAACAATGAGAGATATAGCAGCAATGCTCAAAGAGATAAAGCATGAAAGAGAAGAATATGCAAAATTTGATGTGCTTTTAAAAGGGTCTCCTGCAAATGATGCAAAAGTTCTTGCAACATCTTCCAATGCATCAG 385 0.3922 MMKITEKSDVYSYGVVLLEVLTGKQPIDPTIPDGLHVVDWVRQKRGLEVLDPTLLSRPESEIEEMIQALGIALLCVNSSPDERPTMRDIAAMLKEIKHEREEYAKFDVLLKGSPANDAKVLATSSNAS 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme92897g00001 128 Gene3D Transferase(Phosphotransferase) domain 1 1 113 - -
Trme92897g00001 128 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 2 98 - -
Trme92897g00001 128 ProSiteProfiles Protein kinase domain profile. 1 101 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme92897g00001 128 Pfam Protein tyrosine and serine/threonine kinase 3 92 IPR001245 GO:0004672|GO:0006468
Trme92897g00001 128 SUPERFAMILY Protein kinase-like (PK-like) 3 103 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme92897g00001 Trme-Chr92897 1 385 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme92897g00001 1 98 Receptor kinase-like Gene Family AT4G26540 56.311 2.47e-33 120
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Trme92897g00001 PK_Tyr_Ser-Thr 4.8e-09 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme92897g00001 - - vvo:131649742 239.195