Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme927931g00001 ATGAGTATGGCTGGGTTTAGGTTAAACCCAGTGAGTCAGAAAGTGGCTGAGTCAATTAAAGCGCGGCTTGTGCCAGGAAGCCGAGTTACTGTTAATGAAGAAAACGGTGGCGTTTGCTTTGGTTGGATGGGAAGAACTCTCACTGTTGCATCTGCTTGGCGTTAA 165 0.4727 MSMAGFRLNPVSQKVAESIKARLVPGSRVTVNEENGGVCFGWMGRTLTVASAWR 54
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme927931g00001 54 Pfam GRAS domain family 1 54 IPR005202 -
Trme927931g00001 54 ProSiteProfiles GRAS family profile. 1 54 IPR005202 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme927931g00001 1 54 GRAS Transcription Factor Family AT5G52510 68.966 4.84e-20 79.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Trme927931g00001 GRAS 6.6e-09 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme927931g00001 - - tpra:123914170 108.997