Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme92777g00001 CCTTCTTGTGTTGCTTTCACAAGTGAACAAAGGTTGATTGGTGATGCTGCAAAGAATCAAGCTGCTGTCAACCCTCAAAACACTGTCTTTGATGCTAAGAGGTTAATTGGTAGGAAGTTTAGTGATCCTATCGTTCAAGATGATATATTATTATGGCCCTTCAAGGTCAGTGCTGGTGACAATGACAAACCCATGATTACCGTTAAGTACAAGGACCAGGAGAAGCAACTTTGTGCTGAAGAAGTATCATCTATG 255 0.4078 PSCVAFTSEQRLIGDAAKNQAAVNPQNTVFDAKRLIGRKFSDPIVQDDILLWPFKVSAGDNDKPMITVKYKDQEKQLCAEEVSSM 85
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme92777g00001 85 Gene3D - 1 85 - -
Trme92777g00001 85 PANTHER HEAT SHOCK PROTEIN 70KDA 1 85 IPR013126 GO:0005524|GO:0140662
Trme92777g00001 85 FunFam Heat shock 70 kDa protein 30 85 - -
Trme92777g00001 85 FunFam heat shock 70 kDa protein-like 1 83 - -
Trme92777g00001 85 SUPERFAMILY Actin-like ATPase domain 1 85 IPR043129 -
Trme92777g00001 85 Pfam Hsp70 protein 1 85 IPR013126 GO:0005524|GO:0140662
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme92777g00001 Trme-Chr92777 1 388 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme92777g00001 1 85 Calmodulin-binding Proteins AT1G16030 74.118 3.25e-39 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme92777g00001 K03283 - lja:Lj0g3v0211109.1 147.517