Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme92706g00001 TGTATCTGCAGTCCTTTCAGTCTAGGCTACAACCGTCACGCCAACAACATCGCCGCAGCAGCAAACGTCGTAGTTTTCTCCGTTCATTATAGTTCCGATCCATGGCTCAAAGATCACGCTGATTACAACGTTGTTTTCTTCGCCGGAGACAGTGCCGGAGCCAACCTCGCACACAACATGGCGATGCGAGGCGCTTCGGAAGGTTTCGGAGCATTAAAGCTTCAAGGAATAGTGTTGATTCATCCTTACTTTGGAAATGATGAGAAAGATGAGCTTGTTGAGTATTTGTATCCGAGTTATGGTGGATTTAATGACCCGAAAATACACGCGGCGAAGGATCCGAATCTTTCGAGTCTTGGAGTTGAGAGAGTGCTTGTGTTTGTGGCGGAGAAGGATTTTTTGAGAGAAAGAGGGAGGAGTTATTATGAGGCGGTGAAGAAGAGTGGTTGGAATGGGGAGGCGGAGATGGTGGAGACGGAAGGTGAAGGTCANNNTNNNNNNNNNNTNNNNNNNNNNAAGGAGAAATCTGTGAATCTTGTTAAACAGTTTGCATCTTACATGACGCAGATTGAGAAAGACGTACGATCTTCTTCGTCATTGTGA 603 0.4461 CICSPFSLGYNRHANNIAAAANVVVFSVHYSSDPWLKDHADYNVVFFAGDSAGANLAHNMAMRGASEGFGALKLQGIVLIHPYFGNDEKDELVEYLYPSYGGFNDPKIHAAKDPNLSSLGVERVLVFVAEKDFLRERGRSYYEAVKKSGWNGEAEMVETEGEGXXXXXXXXXKEKSVNLVKQFASYMTQIEKDVRSSSSL 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme92706g00001 200 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative serine active site. 45 57 IPR033140 -
Trme92706g00001 200 Pfam alpha/beta hydrolase fold 34 161 IPR013094 GO:0016787
Trme92706g00001 200 Gene3D alpha/beta hydrolase 1 196 IPR029058 -
Trme92706g00001 200 SUPERFAMILY alpha/beta-Hydrolases 7 188 IPR029058 -
Trme92706g00001 200 PANTHER ARYLACETAMIDE DEACETYLASE 1 164 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme92706g00001 Trme-Chr92706 45 719 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme92706g00001 32 187 Carbohydrate Esterase AT3G48700 38.889 1.16e-29 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme92706g00001 - - mtr:11445231 281.952