Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme92656g00001 ATTGGAGCAATATTTGCCGCGACAGATTCTGTTTGCACGTTGCAGGTGCTAAATCAGGACGAGACACCTTTGTTATATAGTCTTGTATTTGGGGAGGGTGTTGTGAATGATGCTACCTCAGTGGTGCTTTTCAATGCAATTCAAAGCTTTGATCTCGACCGGCTTAATCCTTCAATTGCAGTGCACTTTTTGGGCAACTTCTTGTATTTGTTTATAGCAAGCACACTCCTTGGTGTTTTGACAGGTCTACTTAGTGCTTACGTTATCAAAAAGCTGTACATTGGCAGTTTATTCATAGTAAAACTTAAAAGTTGTTAA 318 0.3962 IGAIFAATDSVCTLQVLNQDETPLLYSLVFGEGVVNDATSVVLFNAIQSFDLDRLNPSIAVHFLGNFLYLFIASTLLGVLTGLLSAYVIKKLYIGSLFIVKLKSC 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme92656g00001 105 PANTHER SODIUM/HYDROGEN EXCHANGER 1 95 IPR018422 GO:0006812|GO:0015385|GO:0016020|GO:1902600
Trme92656g00001 105 Pfam Sodium/hydrogen exchanger family 1 96 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Trme92656g00001 105 Gene3D - 1 46 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme92656g00001 Trme-Chr92656 102 713 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme92656g00001 1 95 Antiporters AT3G05030 85.263 3.41e-48 159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme92656g00001 - - gmx:732573 169.088