Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme92634g00001 GATGTCTTCACTGCTGGAGGTGAGACAGCAGCAACTACCATTAATTGGGCAATGGCCGAGATGATAAAAGATCCGAGAGTTTTGAAGAAAGCACAAGCTGAAGTGAGAGAGGGATTTGATAGAAGAGGAGCGGTTGATGAAGCAGCAATTGATGAGTTTAAATATTTGAAAGCAATAATCAAAGAGTCACTAAGATTACACCCTTCTGTTCCTCTCCTTCTTCCCAGGGAATCTGGACAAGTTTGTGAGATTAATGGTTATCACATACCTGTCAAAAGTAGAGTCATTGTAAATGCTTGGGCCATCGGAAGGGATCCAAAATATTGGA 328 0.4146 DVFTAGGETAATTINWAMAEMIKDPRVLKKAQAEVREGFDRRGAVDEAAIDEFKYLKAIIKESLRLHPSVPLLLPRESGQVCEINGYHIPVKSRVIVNAWAIGRDPKYW 109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme92634g00001 109 PRINTS P450 superfamily signature 58 69 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme92634g00001 109 PRINTS P450 superfamily signature 5 22 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme92634g00001 109 Gene3D Cytochrome P450 1 109 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme92634g00001 109 PRINTS E-class P450 group I signature 14 40 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme92634g00001 109 PRINTS E-class P450 group I signature 57 75 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme92634g00001 109 PRINTS E-class P450 group I signature 98 109 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme92634g00001 109 PANTHER CYTOCHROME P450 71B11-RELATED 1 109 - -
Trme92634g00001 109 Pfam Cytochrome P450 1 109 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme92634g00001 109 SUPERFAMILY Cytochrome P450 2 109 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme92634g00001 Trme-Chr92634 1 328 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme92634g00001 1 109 Cytochrome P450 AT3G26230 50.450 2.21e-38 132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme92634g00001 - - gmx:100801936 184.111