Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme92622g00001 GCATTGGCAGAGAAAGGTGTCAAGTATGAGTACAAGGAAGAGGATCTTGTCAACACCAAGAGTGCATTGCTTCTGCAAATGAATCCAGTTCACAAGAAAATCCCAGTCCTGATCCATAATGGGAAGCCCATTTGTGAATCCCTCATTATTGTTGAGTACATTGATGAGGTTTGGAAGGATCAAGCTCCATTGTTGCCAACTGATCCATACCAGAGAGCTCAAGCCAGATTCTGGACTAATTTTTTTGATAACAAG 255 0.4196 ALAEKGVKYEYKEEDLVNTKSALLLQMNPVHKKIPVLIHNGKPICESLIIVEYIDEVWKDQAPLLPTDPYQRAQARFWTNFFDNK 85
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme92622g00001 85 Gene3D - 64 85 - -
Trme92622g00001 85 SFLD Glutathione Transferase (cytosolic) 1 85 IPR040079 -
Trme92622g00001 85 SFLD Main (cytGST) 1 85 - -
Trme92622g00001 85 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 1 85 IPR045073 -
Trme92622g00001 85 Pfam Glutathione S-transferase, N-terminal domain 1 56 IPR004045 -
Trme92622g00001 85 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 1 62 IPR004045 -
Trme92622g00001 85 SUPERFAMILY Thioredoxin-like 1 84 IPR036249 -
Trme92622g00001 85 CDD GST_N_Tau 1 58 - -
Trme92622g00001 85 Gene3D Glutaredoxin 1 63 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme92622g00001 Trme-Chr92622 1 255 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme92622g00001 1 85 Glutathione S-transferase Gene Family AT1G78340 72.941 1.25e-42 136
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme92622g00001 K00799 - gmx:100781460 158.303