Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme9261g00001 ATGTCGAATACTGTAGGAGGAGCAGAACTTATCGCCTTACTAGGATTGGGGGGAATGCATTTGGTGTTATTCAAGATTGAAGGAAACCACCGATTGCCACCGACTACTCTTTCACCTGGAGAAATGGTTTGTGTGAGAACGTGTGATAGCAGGGGCGCAGTTAATACTTCTTGCATGCAAGGAGTTGTGGACAATCTCGGTGATGATGGGTATAGTATTACCGTTGCTTTAGAGTCACGTCATGGTGATCCTACTTTCTCTAAACTATTTGGGAAGAATGTGCGCATTGATCGTATTCAAGGACTGGCTGATACACTTACCTATGAGCGCAACTGTGAAGCACTAATGCTGCTTCAGAAGAACGGCTTACGAAAGAAAAATCCGGCTATTTCTGTTGTTGCAACTCTATTCGGAGAGGGAGAAGATGCTGCATGGCTTGAGAAGAATAGTTTGGTCGACTGGGAAGAAGAAAAAATGGATGGAACATTAGAAAGTGAATCCTTTGACAAATCTCAGCAGAGAGCAATTGCATTAGGTTTGAATAAGAAGAGGCCATTATTGGTCATTCAAGGGCCTCCCGGTACTGGCAAGACCGGTTTGCTCAAACAACTAATAGCATTTGCCGTTGAACAAGGTGAAAGGGTTCTTGTTACAGCGCCTACCAATGCAGCTGTTGATAATATGGTTGAAAAGCTTTCAAATGTTGGAATAAATATTGTTCGGGTTGGAAATCCAGTTCGTATATCAAAAACAGTAGCATCAAAGTCTTTGGCAGAAATTGTAAATGCGAAGATGGCACCTTTTCGCGAAGAGTTTGAGAGGAAGAAGTCTGATCTAAGGAAAGATCTAAGGCATTGTTTAAAGGATGATTCATTGGCTGCAGGCATACGCCAACTTCTGAAAAAGCTGGCAAAGTCACTAAAGAAACAGGAAAAGCAGACGATAAATGAAGTTTTATCAAGTGCTCA 968 0.4215 MSNTVGGAELIALLGLGGMHLVLFKIEGNHRLPPTTLSPGEMVCVRTCDSRGAVNTSCMQGVVDNLGDDGYSITVALESRHGDPTFSKLFGKNVRIDRIQGLADTLTYERNCEALMLLQKNGLRKKNPAISVVATLFGEGEDAAWLEKNSLVDWEEEKMDGTLESESFDKSQQRAIALGLNKKRPLLVIQGPPGTGKTGLLKQLIAFAVEQGERVLVTAPTNAAVDNMVEKLSNVGINIVRVGNPVRISKTVASKSLAEIVNAKMAPFREEFERKKSDLRKDLRHCLKDDSLAAGIRQLLKKLAKSLKKQEKQTINEVLSSA 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme9261g00001 322 Gene3D - 12 87 - -
Trme9261g00001 322 PANTHER DNA2/NAM7 HELICASE FAMILY MEMBER 28 322 - -
Trme9261g00001 322 Pfam AAA domain 168 313 IPR041677 GO:0004386
Trme9261g00001 322 Coils Coil 269 289 - -
Trme9261g00001 322 Coils Coil 293 313 - -
Trme9261g00001 322 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 145 244 IPR027417 -
Trme9261g00001 322 Gene3D - 88 322 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme9261g00001 Trme-Chr9261 1 1409 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme9261g00001 166 243 Core DNA Replication Machinery Family AT1G08840 35.897 8.08e-07 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme9261g00001 - - aip:107625008 525.783