Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme92537g00001 ATGTTCTTTCAAATATTAGTATTTGCAGCTCTTGCAACCACAACATTTTCAACACTCACAACAAATTACTATGACTACACATGTCCCAACGCTTTGAGTACCATTAGAAGTGTTGTGAAAGACGCTGTTCAAAAAGAGAACCGTATAGGTGCTTCGCTACTACGCTTGCACTTTCATGATTGCTTTGTTAATGGTTGTGATGGTTCACTTCTTTTGGACTCTACACCTTCCATGGATAGTGAGAAAAATGCAAATCCAAATATCAATTCAGCTAGAGGATTTGAAGTGGTGGATGCAATCAAGCAAGCTGTGGATGAAGCATGTGGCAAACCCGTTGTTTCTTGCGCAGATATATTGGCTGT 362 0.3978 MFFQILVFAALATTTFSTLTTNYYDYTCPNALSTIRSVVKDAVQKENRIGASLLRLHFHDCFVNGCDGSLLLDSTPSMDSEKNANPNINSARGFEVVDAIKQAVDEACGKPVVSCADILAV 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme92537g00001 121 ProSiteProfiles Plant heme peroxidase family profile. 18 121 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trme92537g00001 121 PANTHER PEROXIDASE 72-RELATED 17 121 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trme92537g00001 121 ProSitePatterns Peroxidases active site signature. 50 61 IPR019794 GO:0004601
Trme92537g00001 121 PRINTS Haem peroxidase superfamily signature 113 121 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trme92537g00001 121 PRINTS Haem peroxidase superfamily signature 50 64 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trme92537g00001 121 PRINTS Plant peroxidase signature 112 121 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trme92537g00001 121 PRINTS Plant peroxidase signature 52 72 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trme92537g00001 121 PRINTS Plant peroxidase signature 28 47 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trme92537g00001 121 PRINTS Plant peroxidase signature 92 105 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trme92537g00001 121 Pfam Peroxidase 36 121 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trme92537g00001 121 SUPERFAMILY Heme-dependent peroxidases 19 120 IPR010255 GO:0004601|GO:0006979|GO:0020037
Trme92537g00001 121 Gene3D - 19 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme92537g00001 Trme-Chr92537 1 611 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme92537g00001 5 121 Peroxidase AT5G06720 56.410 2.06e-43 143
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme92537g00001 K00430 - gmx:100814067 185.652