Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme92527g00001 ATGCCAGGGATTGGTAAAACAGCCATTGCCAAAGCCATCTATCGTCAGGTTGGTTCCTATTTTGTGCACAACTACTTTCTCGAAAATATCAAGAGATCAGTTCAGAATGAAGATGATACTCTAGTTTCTTTACAAGAGAAACTTCTTATTCAGATTGGCGAAGTGCCTGAAATAGATATATCTACAGTTGAATTGGGAAAAGTGATTTTAAAAGAAAGACTTCGAGGTAAAAGGGTGCTTCTTGTACTTGACGATATTAATAAGTTGGAGCAGCTAAATGCTTTGTGTGAAAGTCGTGAATGGTTTGGTGAAGGTAGCAAAATAATCATCACGACAACAGATAGGAAGCTACTTAGAGATCATGGAGTTGACCATATATACAGAGTGAAAGAACTAGACGAAAATGAATCGCTTGAGCTTTTTAATTGGAAAGCGTTCCGCAGAAAAACTTCTCAAGAAGGTTTTGCTGAACTTTCCAGACAGGTAGTTGCTTGTTCTGGGGGATTGCCTCTTGCTCTTTTAGACCTTGGGATCGACTTCCGCATTTTTGAGAGAACAGTAGATGCCTGGAAGTCTAACTTGGATGAGCTCAAAGTACTTCCCCAAGCTAGAGTACAAAAAATTCTAGAAG 631 0.3914 MPGIGKTAIAKAIYRQVGSYFVHNYFLENIKRSVQNEDDTLVSLQEKLLIQIGEVPEIDISTVELGKVILKERLRGKRVLLVLDDINKLEQLNALCESREWFGEGSKIIITTTDRKLLRDHGVDHIYRVKELDENESLELFNWKAFRRKTSQEGFAELSRQVVACSGGLPLALLDLGIDFRIFERTVDAWKSNLDELKVLPQARVQKILE 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme92527g00001 210 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1 198 IPR044974 GO:0006952
Trme92527g00001 210 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 209 IPR027417 -
Trme92527g00001 210 PRINTS Disease resistance protein signature 73 87 - -
Trme92527g00001 210 PRINTS Disease resistance protein signature 166 180 - -
Trme92527g00001 210 Coils Coil 27 47 - -
Trme92527g00001 210 Gene3D - 1 126 IPR027417 -
Trme92527g00001 210 Pfam NB-ARC domain 1 198 IPR002182 GO:0043531
Trme92527g00001 210 Gene3D - 131 210 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme92527g00001 Trme-Chr92527 65 695 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme92527g00001 1 173 WRKY Transcription Factor Family AT5G45050 34.682 2.43e-24 98.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme92527g00001 - - mtr:11411578 209.149