Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme92304g00001 CAGATGAGGAACCGGGATGCTGCTGTGAAATCAAGAGAGAGGAAGAAGATGTATGTGAAAAACCTTGAGACGAAGAGTAGATATTTTGAAGGGGAATGCAGAAGATTGGAGCATTTGCTCCAGTGCTGCTATGCTGAGAACCATGCTTTGCGGTTTTGTTTGCAATCGCGTGGTGCATTTGGTGCTCCCATGACCATGCAGGAGTCTGCCGTGCTCTTGTTGG 223 0.4798 QMRNRDAAVKSRERKKMYVKNLETKSRYFEGECRRLEHLLQCCYAENHALRFCLQSRGAFGAPMTMQESAVLLL 74
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme92304g00001 74 PANTHER BASIC-LEUCINE ZIPPER TRANSCRIPTION FACTOR F-RELATED 1 74 - -
Trme92304g00001 74 SUPERFAMILY Leucine zipper domain 2 54 IPR046347 GO:0003700|GO:0006355
Trme92304g00001 74 Gene3D - 1 55 - -
Trme92304g00001 74 Pfam bZIP transcription factor 2 39 IPR004827 GO:0003700|GO:0006355
Trme92304g00001 74 CDD bZIP_HY5-like 2 48 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme92304g00001 9 71 bZIP Transcription Factor Family AT1G42990 56.250 6.59e-16 67.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Trme92304g00001 bZIP_1 8.2e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme92304g00001 - - gmx:778132 129.798