Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme92013g00001 GGTCAGCATATGGAAATGCGATTGGTAGAGTATTTTGCTAATGAATTCAATGCACAAGTTGGCGGTGGAATAGATGTGAGAAAGTTTCCAAAGGCTATGGCTAAGTTAAAGAAACAGGTTAAACGAACAAAAGAAATTCTTAGCGCAAACACTGCAGCTCCCATTTCAGTTGAGTCGCTTCATGGTGATTTGGACTTCAGATTGTATTGTTCGGCCTTGTCATAA 225 0.4 GQHMEMRLVEYFANEFNAQVGGGIDVRKFPKAMAKLKKQVKRTKEILSANTAAPISVESLHGDLDFRLYCSALS 74
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme92013g00001 74 PANTHER HSC70CB, ISOFORM G-RELATED 1 68 - -
Trme92013g00001 74 Gene3D Actin; Chain A, domain 4 1 72 - -
Trme92013g00001 74 Pfam Hsp70 protein 1 64 IPR013126 GO:0005524|GO:0140662
Trme92013g00001 74 FunFam Heat shock 70 kDa protein 4 1 71 - -
Trme92013g00001 74 SUPERFAMILY Actin-like ATPase domain 1 69 IPR043129 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme92013g00001 1 66 Calmodulin-binding Proteins AT5G02490 31.884 4.00e-06 40.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme92013g00001 K09486 - gmx:100786898 127.102