Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme920083g00001 CTTAGTAGTCTAGTCAAAGTCATATCAGAAAAAATCGGAATCACTGAAGAGCAGGCAGCTGCTGTTGGCCTCTTAGCTGATCTACCAGAGAGAGATTTAGGCCTCGCGAGACAGCTACTGGATGAAGGTGCCTTTCGGATGGCCATATCGAAGGTGATTGCTATCAAGCAGGGAGAGATCAGGGGCACTCG 191 0.4921 LSSLVKVISEKIGITEEQAAAVGLLADLPERDLGLARQLLDEGAFRMAISKVIAIKQGEIRGTR 64
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme920083g00001 64 PANTHER RING-TYPE E3 UBIQUITIN TRANSFERASE 1 61 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme920083g00001 Trme-Chr920083 40 230 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme920083g00001 1 64 U-box Gene Family AT1G20780 64.062 5.19e-15 65.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme920083g00001 - - gmx:100815928 105.916