Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme91928g00001 ATGACAGGAGAGAAAGTGGTGAGCAACTTGGCTAGATTTGTGGTGGTTGTATGGGTTTTTGTGGTTCTAATTCTGGTTCAAAGTTAYACTGCAAGCTTGACTTCACTCTTAACAGTTGAACAACTAAGGCCAGCTATTACAGATGTTAACCAACTTTTAAAGAATAAGATGAATGTTGGCTATCTCAAAGGTTCTTTTGTTTATGGAATTTTGAAAAACTTGGGTTTCCCAGATTCTCAGCTCATTACATATCAATCACCTGAAGAATGTAATGAGCTTTTCATAAAAGGAAGCGTAAATGGTGGTATTGATGCTGCTTTTGATGAAGTTCCCTATGTTAAGCACTTTCTTGGAACTTATAG 362 0.3646 MTGEKVVSNLARFVVVVWVFVVLILVQSYTASLTSLLTVEQLRPAITDVNQLLKNKMNVGYLKGSFVYGILKNLGFPDSQLITYQSPEECNELFIKGSVNGGIDAAFDEVPYVKHFLGTY 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme91928g00001 120 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 6 118 IPR015683 -
Trme91928g00001 120 Gene3D - 2 74 - -
Trme91928g00001 120 SUPERFAMILY Periplasmic binding protein-like II 27 118 - -
Trme91928g00001 120 Pfam Ligand-gated ion channel 4 87 IPR001320 GO:0015276|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme91928g00001 Trme-Chr91928 1 362 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme91928g00001 8 120 Ion Channels AT5G11210 55.752 1.28e-37 132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme91928g00001 K05387 - qsa:O6P43_019170 177.948