Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme91883g00001 GATATCAAGCCTGACAACTTATTACTTGATAGATATGGACACTTGAGACTGTCTGACTTTGGACTTTGTAAACCATTAGATTGTAGTCAGCTTGAAGAAAAGGATTTTTCTGTCGGTCAGAATGCGAATGGATCTACACATAATGAGGCCAGTTCAACTCCAAAACGCACACAACAAGAACAACTGCAAAACTGGCAAAAGAACAGGAGGACACTTGCTTATTCCACAGTAGGTACACCGGATTATATTGCTCCAGAAGTTCTTTTGAAGAAAGGGTATGGGATGGAATGTGATTG 296 0.402 DIKPDNLLLDRYGHLRLSDFGLCKPLDCSQLEEKDFSVGQNANGSTHNEASSTPKRTQQEQLQNWQKNRRTLAYSTVGTPDYIAPEVLLKKGYGMECD 98
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme91883g00001 98 Gene3D Transferase(Phosphotransferase) domain 1 1 98 - -
Trme91883g00001 98 MobiDBLite consensus disorder prediction 38 65 - -
Trme91883g00001 98 Pfam Protein kinase domain 1 98 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme91883g00001 98 ProSiteProfiles Protein kinase domain profile. 1 98 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme91883g00001 98 SUPERFAMILY Protein kinase-like (PK-like) 1 98 IPR011009 -
Trme91883g00001 98 PANTHER SERINE/THREONINE-PROTEIN KINASE 1 98 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme91883g00001 Trme-Chr91883 50 651 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme91883g00001 1 98 AGC Kinase Gene Family AT2G20470 84.848 2.36e-54 174
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_NDR Trme91883g00001 Pkinase 2.4e-10 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme91883g00001 K08790 - gmx:100805940 189.119