Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme91853g00001 ATTCATCGGAAAAAAGAAAGAACTTCTAAACAAGATGCAACAACAAGTGACATCGTCCAAGAGAGTACTTCTCCATCAAACAGAAGAAATTTGGAATCATTACCGCCTTCTCAAAGTGATGGTACCGGAAACATTAATCCAACCTTAAAGAAAGCTAAAGATCCTGAATTAGTTAAGAACGAGGAAGGAACGTCTTCTCCAATGTCTATTTTATCTGCTTCGAACCCTTCACCTTCTACAAGTCATCAGTTCGAGAATAATCCAAGCTCCCTAAAAGTATCGTCTCCGGATAAACTGGTTGGTGACTTGCATCTATTTGATGGATCGTTGATGCTAACTGCGGAAGAGCTTTCGTGCGCTCCAGCTGAAGTTATTGGTAGGAGTTGTCATGGAACACTCTACAAAGCTACACTTGAATCTGGTCATGTTTTGGCTGTTAAATGGTTAAGAGAAGGAATAACGAAAGGAAAAAAGGAGTTAGCGAGGGAAATTAAGAAACTTGGGACAATCAAGCATCCAAGCTTGGTTTCTCTTCTTGGTTGCTACTTAGGGCCAAAGGAGCATGAGAGACTGATTATATCAAATTACATGAATGCATATTCATTGGACATTTATCTCCATGGTAAGATTATTACTTCATATTCGATAGCAGCTTAG 657 0.3927 IHRKKERTSKQDATTSDIVQESTSPSNRRNLESLPPSQSDGTGNINPTLKKAKDPELVKNEEGTSSPMSILSASNPSPSTSHQFENNPSSLKVSSPDKLVGDLHLFDGSLMLTAEELSCAPAEVIGRSCHGTLYKATLESGHVLAVKWLREGITKGKKELAREIKKLGTIKHPSLVSLLGCYLGPKEHERLIISNYMNAYSLDIYLHGKIITSYSIAA 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme91853g00001 218 ProSiteProfiles Protein kinase domain profile. 119 218 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme91853g00001 218 Pfam Protein tyrosine and serine/threonine kinase 123 209 IPR001245 GO:0004672|GO:0006468
Trme91853g00001 218 Gene3D Phosphorylase Kinase; domain 1 114 196 - -
Trme91853g00001 218 MobiDBLite consensus disorder prediction 1 93 - -
Trme91853g00001 218 MobiDBLite consensus disorder prediction 13 46 - -
Trme91853g00001 218 MobiDBLite consensus disorder prediction 62 93 - -
Trme91853g00001 218 FunFam Leucine-rich repeat receptor-like protein kinase 104 196 - -
Trme91853g00001 218 PANTHER OS07G0626500 PROTEIN 34 207 - -
Trme91853g00001 218 SUPERFAMILY Protein kinase-like (PK-like) 122 211 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme91853g00001 Trme-Chr91853 57 713 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme91853g00001 94 209 Receptor kinase-like Gene Family AT3G51740 47.414 1.50e-27 107
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Trme91853g00001 PK_Tyr_Ser-Thr 2.6e-09 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme91853g00001 - - psat:127117920 360.533