Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme9184g00001 GATGAAATGAAGACATCAGATTCAAATAGAAGGAAGGAGGTTCCTCATATGCTTGCTGGTTCTAGAAATAAAGCAAGCCTGTGTAGTGATATAGAATATAAAAGTCTGACCATTCCTGTGACAGATGCTTCTGTGACGGGCGAGAAGGATGCTATTGCAGTGCGTCGTGAAGATTCAGGTTCGAGTTCAACTAAGCTTTTGCATGTAAAACAAGAATGTCACGAACAGAGAGGACCAGTTCTACCTTCAACCCCAGTAGATCTTTCTTTTCATATAGGTCTTACTAGTACAGAACCAGTTAAAAGTATTCCAGCTTCTTCAAGAGTGGATGCCGGTGGTCATAGTTTAGAAAGTTTAGAGGTTTGTCCTCCAAACCCACAACCTTCCGGCGCTATTAAGGCTAAGAACGAGGATAATCATGAGAAGTTTGATGGATGTTCCACTTCGAATGTAGCAGACAATGCAAGAGCTGTTATTGGAAATATCTCTTGTGGTCCAAACATTCACCGTCAGAAAGGTCCTCGTATTGCAAAGGTTGTCCGGCGCATCAACTGCAATGTTGAGCCTTTGGAATTTGGAGTTGTGCTTTCTGGAAAATCATGGTGCAGCAGTCAGGCTATATTTCCAAAGGGATTTAGAAGCCGCGTTCGATACATAAATATCTTAGATCCATGCAGTACATGTTACTATATTTCAGAAATTCTTGATGCTGGACGTGGTTCACCTCTATTTATGGTTTCCTTGGAAAATAATCCAAGTGAGGGTCTTCCTCCTTTACATCCTCCTGGCAGCCTTGATGGCTTTGAAATGTTTGGGTTTTCTTCACCAGCAATAGTGCAGAGGAAAAAAGTAGGGGATGCCCAATGGTGA 870 0.4218 DEMKTSDSNRRKEVPHMLAGSRNKASLCSDIEYKSLTIPVTDASVTGEKDAIAVRREDSGSSSTKLLHVKQECHEQRGPVLPSTPVDLSFHIGLTSTEPVKSIPASSRVDAGGHSLESLEVCPPNPQPSGAIKAKNEDNHEKFDGCSTSNVADNARAVIGNISCGPNIHRQKGPRIAKVVRRINCNVEPLEFGVVLSGKSWCSSQAIFPKGFRSRVRYINILDPCSTCYYISEILDAGRGSPLFMVSLENNPSEGLPPLHPPGSLDGFEMFGFSSPAIVQRKKVGDAQW 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme9184g00001 289 Gene3D - 186 258 - -
Trme9184g00001 289 MobiDBLite consensus disorder prediction 1 18 - -
Trme9184g00001 289 SMART fyrn_3 193 237 IPR003888 GO:0005634
Trme9184g00001 289 Pfam F/Y-rich N-terminus 192 234 IPR003888 GO:0005634
Trme9184g00001 289 ProSiteProfiles FYR domain FYRN motif profile. 179 237 IPR003888 GO:0005634
Trme9184g00001 289 MobiDBLite consensus disorder prediction 1 22 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme9184g00001 Trme-Chr9184 1 1329 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme9184g00001 145 280 JUMONJI Transcription Factor Family AT1G08620 58.721 9.24e-56 192
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme9184g00001 K11446 - gmx:100809262 408.297