Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme9174g00001 CACTATTATCAAGTAGAAGAAGACTGGTCTGAAAATAATCGATATTCAAACGCGGGTTCTATGAAAAAGCTGATTAATGAAGAGCTATCNNNNNNNNNNANNNNNNNNNNANNNNCACCAAGCATTGTGGCAAGGTTGATGGGGATAGATATGATGCCGGTAGACACTAAATATGTCGCTCCATCAGATAAAAAAATAAGCGAAAATATGGGGAAGAAGTTTTCAAACAAGGGAACAAATGAAAGGAGTTCAGTTAGTTTGGAATGTTCCAACTTTAATTCTTCTAGGCATGTTGAATTTGATTCATTTCACAAAGTCGTAGAGGATGACAATGATGATGGATGGGGACGGAGTCTTGGAAAACCAAGGCGACGAGAACATCCACAGGAAGAAGAACTGCAGAAATTCAAGAAAGAGTTTGAAGCATATCAAGCAGCAAGGTTTCAGGAATGTTCAAAGTTCGCTGAAATCGGAAGTGTATCTAACCGATTGATTTTTCAAGAGAACCTGAACAAGGAAAAGGTTGCAGTTGCACATAATACAAGTATGCAAAGAAAAGTTTTTCCTTCAAAGAGCAGAACTCTAAGTAGAGACTTTGAAGATTCCTTAATGTTGAAATCTTATAACAGATTAGACACATCTTCTCCAACCCGAATAGTTATCTTGAAGCCTGGTCCTGATAGCATATTTAATCATGAAGAGAATTGGACAAATTCATCAGGAACTTTACAAGGGAGACATAGTATAGAAGATTTTCTCGAGGAGGTGAAAGAGCGTTTGAAANNNNNNNNNNANNNNNNNNNNANNNNNNNNNNANNNNNNNNNNANNNNNNNNNNANNNNNNNNNNANNCAATAAAAAACCATCTGATCCTAAACTTATCGCTCGTCAAATAGTAAAGCAAGTCAAAGAAAATGTGACTAGAGATTCCGACTCAAATTCAGTCTGCTCAGAATCAACAAGATCATCGAAAGGTGAAGTGCAGTTCAATGGACCAAGTTTCAACGAATTTATCAGTAGAGATTCAAGGAGTTACTTGTCAGAGAAGCTAACAAATGTTGTAAAAAGTGAAAGACATGATGATTCTGAGGGGAACACAAGATCAAATGCATTTGAGAATCACAGAGTTAAACTCAAGAAGACAGAAGATGTTTTGAAAAGTGCAAATGATTGGGAAATATCGAAAGAAGAAACAGAAATACAAACAGGATCTTTCAGGCATGAACAAGACAACAACATATTTTTCCACAAGGAGTTATGGTCTCCGAGGAACCTTGTAAGATCCTTGTCTGCTCCTGTATCAAGATCAGGAACATCATTTGGAAAGCTTCTTCTAGAGGACCGACACATTTTAACCGGTGCTCATATTCGGAGGAAGCTTGAAGCTGTTGAAACTATGTCTGTTGATGTTAAAAAACAGAAAAAAGAGAGGTTTAATAATATTAAAGAAAAGGTCTCCAATTTTAGATACAGTTTTGCTCTAAGAGGGAGGATTTTCGGCAAGAGGAATCAATCAATGGTAGAATCACATGGCAATGAATACCGTCCAACAATGAGAGATATCACAAGTGGTCCGACAGTTCTTATGAACTGCGGCGGCGAGAGACAC 1608 0.3563 HYYQVEEDWSENNRYSNAGSMKKLINEELSXXXXXXXXXPSIVARLMGIDMMPVDTKYVAPSDKKISENMGKKFSNKGTNERSSVSLECSNFNSSRHVEFDSFHKVVEDDNDDGWGRSLGKPRRREHPQEEELQKFKKEFEAYQAARFQECSKFAEIGSVSNRLIFQENLNKEKVAVAHNTSMQRKVFPSKSRTLSRDFEDSLMLKSYNRLDTSSPTRIVILKPGPDSIFNHEENWTNSSGTLQGRHSIEDFLEEVKERLKXXXXXXXXXXXXXXXXXXXXXXXNKKPSDPKLIARQIVKQVKENVTRDSDSNSVCSESTRSSKGEVQFNGPSFNEFISRDSRSYLSEKLTNVVKSERHDDSEGNTRSNAFENHRVKLKKTEDVLKSANDWEISKEETEIQTGSFRHEQDNNIFFHKELWSPRNLVRSLSAPVSRSGTSFGKLLLEDRHILTGAHIRRKLEAVETMSVDVKKQKKERFNNIKEKVSNFRYSFALRGRIFGKRNQSMVESHGNEYRPTMRDITSGPTVLMNCGGERH 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme9174g00001 536 MobiDBLite consensus disorder prediction 308 327 - -
Trme9174g00001 536 Coils Coil 285 287 - -
Trme9174g00001 536 MobiDBLite consensus disorder prediction 307 327 - -
Trme9174g00001 536 Coils Coil 250 261 - -
Trme9174g00001 536 PANTHER RB1-INDUCIBLE COILED-COIL PROTEIN 2 536 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme9174g00001 21 524 TRM (TON1 Recruiting Motif) Superfamily AT2G17550 35.283 5.31e-62 214
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme9174g00001 - - gmx:100789616 671.774