Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme91624g00001 ATGAAACTTCTCCAAGATCTTGTACCAGGTTGCAATAAGGTTACTGGAAAAGCACTTATGCTTGATGAAATTATAAACTATGTTCAGTCATTGCAACGTCAAGTTGAGTTTTTGTCTATGAAATTGTCTTCTGTTAACACAAGGATGGATTTAAGTATTGAAAGTCTTGTTCTATCAAAAGAT 183 0.3279 MKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLSSVNTRMDLSIESLVLSKD 61
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme91624g00001 61 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 2 49 IPR036638 GO:0046983
Trme91624g00001 61 Gene3D - 1 54 IPR036638 GO:0046983
Trme91624g00001 61 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 1 61 IPR024097 GO:0006355
Trme91624g00001 61 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 1 31 IPR011598 GO:0046983
Trme91624g00001 61 Coils Coil 28 48 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme91624g00001 Trme-Chr91624 14 406 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme91624g00001 1 61 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G07340 88.525 2.54e-31 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme91624g00001 - - jre:109008511 109.768