Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme915g00001 ATGACTTTGTTGTCCAAGGCCGTTTTTAACGAAGGAATGAAAACCTCTGTGTTTGTCTTTTATAGACAACTGATCGGAGCCATGATTATGGTCCCTATGGCTTTGATATTTGAAAGAATTGCTTTAGCTCTTAATGTTCATGGTATTGCCCTTTCTTACACTTCTGCTATGTTGGGTGCTGCAATTACAAATTGCCTTCCTGCTTCAACATTCTTCTTTGCTGTTCTGCTCAGATTGGAAAAGGTAAATATAAGGACAAAATCTGGAATTTCAAAGATAGGGAGTGTATTATTGTGTATAGCTGGTGTAGCGATTCTTGCATTTTACAAGGGACCCCAATTAGGGATTTTATCTGGATATCATCACAACAATCAATATCAGGAAGATAATTTGTCAAATGGCAAAAAATGGATTTTGGGTGCTTTCCTCTTGTTCCTAGCCACCATCATGTGGAGTTTGTGGATTATATTTCAGCTCCTATCAAGTGCAATTCAGTCATTTGTTATTGCCATAACTTTTGAAAGAGATATGGAGCAGTGGAAATTGGGTTGGAACATGAGGCTGCTAGCTGTTGTTTACTGTGGGGTATTCGTGACTGCAGTTGCATACTATCTGCAAGCATGGGTGATTGAGAAGAGAGGACCAATTTTCCCAGCAACTTGGACCCCACTGAGTTTTATAATTGCCACGATTGGTTCTGTCTTGTTCTTGGGCGAGCCACTGCGTTTAGGGAGTGTTTTGGGTGGGATTTTGCTGGTTCTAAGTCTGTACACTGTTTTGTGGGCAAAAAGCAAAGAAGCAATCACTCGTCATCAGAATTCTTTACCTACTCAAGCAAATATAGAATGTGCAGATAAGGTGAAAACAGTGGACGACGTAAGTAGCAAACCACCCCAATGA 900 0.4033 MTLLSKAVFNEGMKTSVFVFYRQLIGAMIMVPMALIFERIALALNVHGIALSYTSAMLGAAITNCLPASTFFFAVLLRLEKVNIRTKSGISKIGSVLLCIAGVAILAFYKGPQLGILSGYHHNNQYQEDNLSNGKKWILGAFLLFLATIMWSLWIIFQLLSSAIQSFVIAITFERDMEQWKLGWNMRLLAVVYCGVFVTAVAYYLQAWVIEKRGPIFPATWTPLSFIIATIGSVLFLGEPLRLGSVLGGILLVLSLYTVLWAKSKEAITRHQNSLPTQANIECADKVKTVDDVSSKPPQ 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme915g00001 299 SUPERFAMILY Multidrug resistance efflux transporter EmrE 189 264 - -
Trme915g00001 299 PANTHER WAT1-RELATED PROTEIN 1 271 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme915g00001 Trme-Chr915 414 2565 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme915g00001 1 297 Nodulin-like Gene Family AT1G44800 29.586 5.07e-51 170
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme915g00001 - - vun:114162763 346.665