Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme91541g00001 CCTCTTCCCGCTGAAGAAGAGAACGCATTGAAGCAAACTATCCAGGAAATGTTAGGGTCTGGGAAAACAGTTAAGCTTGAACAGAAGATTGATCCAAGCATACTTGGTGGTCTTGTGCTTGAATTCAACCAAAAACTCTTTGACATGTCGATAAGGACTAGGGCGCAACAGATGGAGAGGAGCCTCCGAGAACCGATAAACATTTCCATCTAG 213 0.446 PLPAEEENALKQTIQEMLGSGKTVKLEQKIDPSILGGLVLEFNQKLFDMSIRTRAQQMERSLREPINISI 70
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme91541g00001 70 PRINTS ATP synthase delta subunit signature 22 37 IPR000711 GO:0015986|GO:0046933
Trme91541g00001 70 PRINTS ATP synthase delta subunit signature 37 55 IPR000711 GO:0015986|GO:0046933
Trme91541g00001 70 ProSitePatterns ATP synthase delta (OSCP) subunit signature. 24 43 IPR020781 GO:0015986|GO:0016020|GO:0046933
Trme91541g00001 70 PANTHER ATP SYNTHASE DELTA CHAIN 2 64 IPR000711 GO:0015986|GO:0046933
Trme91541g00001 70 Pfam ATP synthase delta (OSCP) subunit 1 62 IPR000711 GO:0015986|GO:0046933
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme91541g00001 1 69 Primary Pumps ATPases AT5G13450 63.768 1.32e-28 99.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme91541g00001 K02137 - lang:109326184 112.079